Plot k comparison

Plot the results of comparing k values

Usage

plot_k_comparison(k_comparison)

Arguments

k_comparison

data.frame with k value comparisons returned from the compare_k_vals function.

Value

a ggplot figure

Examples

data(musica)
k_comparison <- compare_k_vals(musica, "SBS96",
  reps = 3, min_k = 1,
  max_k = 5
)
#> 
#> k = 1:
#> Calculating signatures on original count table...
#> 
#> Replicate 1 of 3...
#> Replicate 2 of 3...
#> Replicate 3 of 3...
#> 
#> k = 2:
#> Calculating signatures on original count table...
#> 
#> Replicate 1 of 3...
#> Replicate 2 of 3...
#> Replicate 3 of 3...
#> 
#> k = 3:
#> Calculating signatures on original count table...
#> 
#> Replicate 1 of 3...
#> Replicate 2 of 3...
#> Replicate 3 of 3...
#> 
#> k = 4:
#> Calculating signatures on original count table...
#> 
#> Replicate 1 of 3...
#> Replicate 2 of 3...
#> Replicate 3 of 3...
#> 
#> k = 5:
#> Calculating signatures on original count table...
#> 
#> Replicate 1 of 3...
#> Replicate 2 of 3...
#> Replicate 3 of 3...
#> Warning: Removed 1 row containing missing values or values outside the scale range
#> (`geom_line()`).
#> Warning: Removed 1 row containing missing values or values outside the scale range
#> (`geom_point()`).

plot_k_comparison(k_comparison)
#> Warning: Removed 1 row containing missing values or values outside the scale range
#> (`geom_line()`).
#> Warning: Removed 1 row containing missing values or values outside the scale range
#> (`geom_point()`).