This function is to be used to specify which
setSCTKDisplayRow(inSCE, featureDisplayRow)Arguments
- inSCE
Input SingleCellExperiment object with saved dimension reduction components or a variable with saved results. Required.
- featureDisplayRow
Indicates which column name of rowData to be used for plots.
Value
A SingleCellExperiment object with the specific column name of rowData to be used for plotting stored in metadata.
Examples
data(scExample, package="singleCellTK")
sce <- subsetSCECols(sce, colData = "type != 'EmptyDroplet'")
sce <- setSCTKDisplayRow(inSCE = sce, featureDisplayRow = "feature_name")
plotSCEViolinAssayData(inSCE = sce, feature = "ENSG00000019582")
