plotScanpyHVG

plotScanpyHVG

plotScanpyHVG(inSCE, log = FALSE)

Arguments

inSCE

Input SingleCellExperiment object.

log

Plot on logarithmic axes. Default FALSE.

Value

plot object

Examples

data(scExample, package = "singleCellTK")
if (FALSE) {
sce <- runScanpyNormalizeData(sce, useAssay = "counts")
sce <- runScanpyFindHVG(sce, useAssay = "scanpyNormData", method = "seurat")
plotScanpyHVG(sce)
}