R/scran_modelGeneVar.R
scranModelGeneVar.Rd
scranModelGeneVar Generates and stores variability data from scran::modelGeneVar in the input singleCellExperiment object
scranModelGeneVar(inSCE, assayName)
a singleCellExperiment object
selected assay to compute variable features from
inSCE updated singleCellExperiment object that contains variable feature metrics in rowData
data(sce_chcl, package = "scds")
sce_chcl <- scranModelGeneVar(sce_chcl, "counts")
#> Warning: collapsing to unique 'x' values