This function is to be used to specify which
setSCTKDisplayRow(inSCE, featureDisplayRow)
Arguments
| inSCE | Input SingleCellExperiment object with saved dimension reduction components or a variable with saved results. Required. |
|---|---|
| featureDisplayRow | Indicates which column name of rowData to be used for plots. |
Value
A SingleCellExperiment object with the specific column name of rowData to be used for plotting stored in metadata.
Examples
data(scExample, package="singleCellTK") sce <- subsetSCECols(sce, colData = "type != 'EmptyDroplet'") sce <- setSCTKDisplayRow(inSCE = sce, featureDisplayRow = "feature_name") plotSCEViolinAssayData(inSCE = sce, feature = "ENSG00000019582")
