R/seuratFunctions.R
plotSeuratHVG.RdplotSeuratHVG Plot highly variable genes from input sce object (must have highly variable genes computations stored)
plotSeuratHVG(inSCE, labelPoints = 0)(sce) object that contains the highly variable genes computations
Numeric value indicating the number of top genes that
should be labeled.
Default is 0, which will not label any point.
plot object
data(scExample, package = "singleCellTK")
if (FALSE) {
sce <- runSeuratNormalizeData(sce, useAssay = "counts")
sce <- runSeuratFindHVG(sce, useAssay = "counts")
plotSeuratHVG(sce)
}