Use this function to run the single cell analysis app.
singleCellTK(inSCE = NULL, includeVersion = TRUE, theme = "yeti")
inSCE | Input SingleCellExperiment object. |
---|---|
includeVersion | Include the version number in the SCTK header. The default is TRUE. |
theme | The bootswatch theme to use for the singleCellTK UI. The default is 'flatly'. |
The shiny app will open
if (FALSE) { #Upload data through the app singleCellTK() # Load the app with a SingleCellExperiment object data("mouseBrainSubsetSCE") singleCellTK(mouseBrainSubsetSCE) }