Plot the differential Abundance
plotClusterAbundance(inSCE, cluster, variable)
inSCE | A |
---|---|
cluster | A single |
variable | A single |
A list
with 4 ggplot
objects.
This function will visualize the differential abundance in two given variables, by making bar plots that presents the cell counting and fraction in different cases.
data("mouseBrainSubsetSCE", package = "singleCellTK") plotClusterAbundance(inSCE = mouseBrainSubsetSCE, cluster = "tissue", variable = "level1class")#> [[1]]#> #> [[2]]#> #> [[3]]#> #> [[4]]#>