Plot reconstruction error for a sample — plot_sample_reconstruction

Displays the observed distribution of counts for each mutation type, the distribution of reconstructed counts for each mutation type using the inferred mutational signatures, and the difference between the two distributions.

plot_sample_reconstruction_error(result, sample, plotly = FALSE)

Arguments

result: A musica_result object generated by a mutational discovery or prediction tool.
sample: Name of the sample within the musica_result object.
plotly: If TRUE, the the plot will be made interactive using plotly. Default FALSE.

Value

Generates a ggplot or plotly object

Examples

data(res)
plot_sample_reconstruction_error(res, "TCGA-ER-A197-06A-32D-A197-08")
#> Warning: Removed 85 rows containing missing values (`position_stack()`).